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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha : |
19/04/2023 |
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Actualizado : |
19/04/2023 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Autor : |
CECCOBELLI, S.; LANDI, V.; SENCZUK , G.; MASTRANGELO , S.; SARDINA , M.T.; BEN-JEMAA, S.; PERSICHILLI , C.; KARSLI , T.; BÂLTEANU, V.-A.; RASCHIA , M.A.; POLI, M.A.; CIAPPESONI, G.; MUCHADEYI , F.C.; DZOMBA, E.F.; KUNENE , N.W.; LÜHKEN, G.; DENISKOVA, T.E.; DOTSEV, A.V.; ZINOVIEVA , N.A.; ZSOLNAI , A.; ANTON , I.; KUSZA , S.; CAROLINO , N.; SANTOS-SILVA, F.; KAWECKA, A.; SWIATEK , M.; NIZNIKOWSKI , R.; SPEHAR , M.; ANAYA , G.; GRANERO , A.; PERLOIRO , T.; CARDOSO , P.; GRANDE , S.; LÓPEZ DE LOS SANTOS , B.; DANCHIN-BURGE , C.; PASQUINI , M.; MARTÍNEZ MARTÍNEZ , A.; DELGADO BERMEJO , J.V.; LASAGNA , E.; CIANI , E.; SARTI , F.M.; PILLA , F. |
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Afiliación : |
SIMONE CECCOBELLI, Department of Agricultural, Food and Environmental Sciences, Università Politecnica delle Marche, 60131, Ancona, Italy; VINCENZO LANDI, Department of Veterinary Medicine, University of Bari "Aldo Moro", 70010, Valenzano, Italy; GABRIELE SENCZUK, Department of Agricultural, Environmental and Food Sciences, University of Molise, 86100, Campobasso, Italy; SALVATORE MASTRANGELO, Department of Agricultural, Food and Forest Sciences, University of Palermo, 90128, Palermo, Italy; MARIA TERESA SARDINA, Department of Agricultural, Food and Forest Sciences, University of Palermo, 90128, Palermo, Italy; SLIM BEN-JEMAA, Laboratoire des Productions Animales et Fourragères, Institut National de la Recherche Agronomique de Tunisie, Université de Carthage, 2049, Ariana, Tunisia; CHRISTIAN PERSICHILLI, Department of Agricultural, Environmental and Food Sciences, University of Molise, 86100, Campobasso, Italy; TAKI KARSLI, Department of Animal Science, Faculty of Agriculture, Eskisehir Osmangazi University, 26040, Eskisehir, Turkey; VALENTIN-ADRIAN BÂLTEANU, Laboratory of Genomics, Biodiversity, Animal Breeding and Molecular Pathology, Institute of Life Sciences, University of Agricultural Sciences and Veterinary Medicine of Cluj-Napoca, 400372, Cluj-Napoca, Romania; MARÍA AGUSTINA RASCHIA, Instituto de Genética "Ewald A. Favret", Instituto Nacional de Tecnología Agropecuaria, CICVyA-CNIA, B1686, Hurlingham, Buenos Aires, Argentina; MARIO ANDRÉS POLI, Instituto de Genética "Ewald A. Favret", Instituto Nacional de Tecnología Agropecuaria, CICVyA-CNIA, B1686, Hurlingham, Buenos Aires, Argentina; CARLOS GABRIEL CIAPPESONI SCARONE, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; FARAI CATHERINE MUCHADEYI, Agricultural Research Council - Biotechnology Platform, Onderstepoort, 0110, Pretoria, South Africa; EDGAR FARAI DZOMBA, Discipline of Genetics, School of Life Sciences, University of KwaZulu-Natal, 3209, Scottsville, Pietermaritzburg, South Africa; NOKUTHULA WINFRED KUNENE, Department of Agriculture, University of Zululand, 3886, Kwadlangezwa, South Africa; GESINE LÜHKEN, Institute of Animal Breeding and Genetics, Justus Liebig University, 35390, Giessen, Germany; TATIANA EVGENIEVNA DENISKOVA, L.K. Ernst Federal Research Center for Animal Husbandry, 142132, Podolsk, Russian Federation; ARSEN VLADIMIROVICH DOTSEV, L.K. Ernst Federal Research Center for Animal Husbandry, 142132, Podolsk, Russian Federation; NATALIA ANATOLIEVNA ZINOVIEVA, L.K. Ernst Federal Research Center for Animal Husbandry, 142132, Podolsk, Russian Federation; ATTILA ZSOLNAI, Department of Animal Breeding, Institute of Animal Science, Hungarian University of Agriculture and Life Sciences, Kaposvár Campus, 2053, Herceghalom, Hungary; ISTVÁN ANTON, Department of Animal Breeding, Institute of Animal Science, Hungarian University of Agriculture and Life Sciences, Kaposvár Campus, 2053, Herceghalom, Hungary; SZILVIA KUSZA, Centre for Agricultural Genomics and Biotechnology, Faculty of Agricultural and Food Sciences and Environmental Management, University of Debrecen, 4032, Debrecen, Hungary; NUNO CAROLINO, Instituto Nacional de Investigação Agrária e Veterinária, 2005-048, Vale de Santarém, Portugal; FÁTIMA SANTOS-SILVA, Instituto Nacional de Investigação Agrária e Veterinária, 2005-048, Vale de Santarém, Portugal; ALDONA KAWECKA, Department of Sheep and Goat Breeding, National Research Institute of Animal Production, 32-083, Kraków, Poland; MARCIN SWIATEK, Department of Animal Breeding, Institute of Animal Sciences, Warsaw University of Life Sciences-SGGW, 02-786, Warsaw, Poland; ROMAN NIZNIKOWSKI, Department of Animal Breeding, Institute of Animal Sciences, Warsaw University of Life Sciences-SGGW, 02-786, Warsaw, Poland; MARIJA SPEHAR, Croatian Agency for Agriculture and Food, 10000, Zagreb, Croatia; GABRIEL ANAYA, MERAGEM Group, Department of Genetics, University of Córdoba, 14071, Córdoba, Spain; ANTONIO GRANERO, Asociación Nacional de Criadores de Ganado Merino (ACME), 28028, Madrid, Spain; TIAGO PERLOIRO, Associação Nacional de Criadores de Ovinos da Raça Merina (ANCORME), 7005-665, Évora, Portugal; PEDRO CARDOSO, Associação de Produtores Agropecuários (OVIBEIRA), 6000-244, Castelo Branco, Portugal; SILVERIO GRANDE, Associazione Nazionale della Pastorizia (ASSONAPA), 00187, Rome, Italy; BEATRIZ LÓPEZ DE LOS SANTOS, Departamento de Investigación y Desarrollo, EA GROUP SC, 06700, Villanueva de la Serena, Spain; CORALIE DANCHIN-BURGE, Institut de l'Elevage, 75595, Paris Cedex 12, France; MARINA PASQUINI, Department of Agricultural, Food and Environmental Sciences, Università Politecnica delle Marche, 60131, Ancona, Italy; AMPARO MARTÍNEZ MARTÍNEZ, Departamento de Genética, Universidad de Córdoba, 14071, Córdoba, Spain; JUAN VICENTE DELGADO BERMEJO, Departamento de Genética, Universidad de Córdoba, 14071, Córdoba, Spain; EMILIANO LASAGNA, Department of Agricultural, Food and Environmental Sciences, University of Perugia, 06121, Perugia, Italy; ELENA CIANI, Department of Bioscience, Biotechnology and Biopharmaceutics, University of Bari "Aldo Moro", 70124, Bari, Italy; FRANCESCA MARIA SARTI, Department of Agricultural, Food and Environmental Sciences, University of Perugia, 06121, Perugia, Italy; FABIO PILLA, Department of Agricultural, Environmental and Food Sciences, University of Molise, 86100, Campobasso, Italy. |
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Título : |
A comprehensive analysis of the genetic diversity and environmental adaptability in worldwide Merino and Merino-derived sheep breeds. |
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Fecha de publicación : |
2023 |
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Fuente / Imprenta : |
Genetics, Selection, Evolution : GSE, 2023, volume 55, issue 1, article 24. OPEN ACCESS. doi: https://doi.org/10.1186/s12711-023-00797-z |
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ISSN : |
1297-9686 |
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DOI : |
10.1186/s12711-023-00797-z |
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Idioma : |
Inglés |
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Notas : |
Article history: Received 27 July 2022; Accepted 24 March 2023; Published 03 April 2023. -- Corresponding author: Simone Ceccobelli, email: s.ceccobelli@staff.univpm.it -- Document type: Article, Gold Open Access. -- FUNDING: This study was supported in part by the "Fondazione Cassa di Risparmio di Perugia" (Project "Promozione e valorizzazione delle razze ovine di derivazione Merinos", Agreement No. 2017.0470.013-Ricerca scientifica e tecnologica) and WOOLLY project approved by Apulia Regional government within the program "Contribution to innovative scientific research projects of high international standard" (art. 22 della legge regionale 30 novembre 2019, n. 52). The SNP-genotyping of the Groznensk and Salsk breeds was financially supported by the RMSHE, grant no. 075-15-2021-1037 (internal no. 15.BPK.21.0001). SNP-genotyping of Kyrgyz Mountain Merino was supported by RSF No. 21-6600007. -- Supplementary Information available. -- |
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Contenido : |
BACKGROUND: To enhance and extend the knowledge about the global historical and phylogenetic relationships between Merino and Merino-derived breeds, 19 populations were genotyped with the OvineSNP50 BeadChip specifically for this study, while an additional 23 populations from the publicly available genotypes were retrieved. Three complementary statistical tests, Rsb (extended haplotype homozygosity between-populations), XP-EHH (cross-population extended haplotype homozygosity), and runs of homozygosity (ROH) islands were applied to identify genomic variants with potential impact on the adaptability of Merino genetic type in two contrasting climate zones. CONCLUSIONS: To the best of our knowledge, this is the first comprehensive dataset that includes most of the Merino and Merino-derived sheep breeds raised in different regions of the world. The results provide an in-depth picture of the genetic makeup of the current Merino and Merino-derived breeds, highlighting the possible selection pressures associated with the combined effect of anthropic and environmental factors. The study underlines the importance of Merino genetic types as invaluable resources of possible adaptive diversity in the context of the occurring climate changes. © 2023. The Author(s). |
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Palabras claves : |
Animals; Domestic sheep; Genetic Variation; Genotype; Sheep. |
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Asunto categoría : |
L10 Genética y mejoramiento animal |
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URL : |
https://gsejournal.biomedcentral.com/counter/pdf/10.1186/s12711-023-00797-z.pdf
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Marc : |
LEADER 04216naa a2200709 a 4500
001 1064044
005 2023-04-19
008 2023 bl uuuu u00u1 u #d
022 $a1297-9686
024 7 $a10.1186/s12711-023-00797-z$2DOI
100 1 $aCECCOBELLI, S.
245 $aA comprehensive analysis of the genetic diversity and environmental adaptability in worldwide Merino and Merino-derived sheep breeds.$h[electronic resource]
260 $c2023
500 $aArticle history: Received 27 July 2022; Accepted 24 March 2023; Published 03 April 2023. -- Corresponding author: Simone Ceccobelli, email: s.ceccobelli@staff.univpm.it -- Document type: Article, Gold Open Access. -- FUNDING: This study was supported in part by the "Fondazione Cassa di Risparmio di Perugia" (Project "Promozione e valorizzazione delle razze ovine di derivazione Merinos", Agreement No. 2017.0470.013-Ricerca scientifica e tecnologica) and WOOLLY project approved by Apulia Regional government within the program "Contribution to innovative scientific research projects of high international standard" (art. 22 della legge regionale 30 novembre 2019, n. 52). The SNP-genotyping of the Groznensk and Salsk breeds was financially supported by the RMSHE, grant no. 075-15-2021-1037 (internal no. 15.BPK.21.0001). SNP-genotyping of Kyrgyz Mountain Merino was supported by RSF No. 21-6600007. -- Supplementary Information available. --
520 $aBACKGROUND: To enhance and extend the knowledge about the global historical and phylogenetic relationships between Merino and Merino-derived breeds, 19 populations were genotyped with the OvineSNP50 BeadChip specifically for this study, while an additional 23 populations from the publicly available genotypes were retrieved. Three complementary statistical tests, Rsb (extended haplotype homozygosity between-populations), XP-EHH (cross-population extended haplotype homozygosity), and runs of homozygosity (ROH) islands were applied to identify genomic variants with potential impact on the adaptability of Merino genetic type in two contrasting climate zones. CONCLUSIONS: To the best of our knowledge, this is the first comprehensive dataset that includes most of the Merino and Merino-derived sheep breeds raised in different regions of the world. The results provide an in-depth picture of the genetic makeup of the current Merino and Merino-derived breeds, highlighting the possible selection pressures associated with the combined effect of anthropic and environmental factors. The study underlines the importance of Merino genetic types as invaluable resources of possible adaptive diversity in the context of the occurring climate changes. © 2023. The Author(s).
653 $aAnimals
653 $aDomestic sheep
653 $aGenetic Variation
653 $aGenotype
653 $aSheep
700 1 $aLANDI, V.
700 1 $aSENCZUK , G.
700 1 $aMASTRANGELO , S.
700 1 $aSARDINA , M.T.
700 1 $aBEN-JEMAA, S.
700 1 $aPERSICHILLI , C.
700 1 $aKARSLI , T.
700 1 $aBÂLTEANU, V.-A.
700 1 $aRASCHIA , M.A.
700 1 $aPOLI, M.A.
700 1 $aCIAPPESONI, G.
700 1 $aMUCHADEYI , F.C.
700 1 $aDZOMBA, E.F.
700 1 $aKUNENE , N.W.
700 1 $aLÜHKEN, G.
700 1 $aDENISKOVA, T.E.
700 1 $aDOTSEV, A.V.
700 1 $aZINOVIEVA , N.A.
700 1 $aZSOLNAI , A.
700 1 $aANTON , I.
700 1 $aKUSZA , S.
700 1 $aCAROLINO , N.
700 1 $aSANTOS-SILVA, F.
700 1 $aKAWECKA, A.
700 1 $aSWIATEK , M.
700 1 $aNIZNIKOWSKI , R.
700 1 $aSPEHAR , M.
700 1 $aANAYA , G.
700 1 $aGRANERO , A.
700 1 $aPERLOIRO , T.
700 1 $aCARDOSO , P.
700 1 $aGRANDE , S.
700 1 $aLÓPEZ DE LOS SANTOS , B.
700 1 $aDANCHIN-BURGE , C.
700 1 $aPASQUINI , M.
700 1 $aMARTÍNEZ MARTÍNEZ , A.
700 1 $aDELGADO BERMEJO , J.V.
700 1 $aLASAGNA , E.
700 1 $aCIANI , E.
700 1 $aSARTI , F.M.
700 1 $aPILLA , F.
773 $tGenetics, Selection, Evolution : GSE, 2023, volume 55, issue 1, article 24. OPEN ACCESS. doi: https://doi.org/10.1186/s12711-023-00797-z
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INIA Las Brujas (LB) |
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 | Acceso al texto completo restringido a Biblioteca INIA La Estanzuela. Por información adicional contacte bib_le@inia.org.uy. |
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Registro completo
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Biblioteca (s) : |
INIA La Estanzuela. |
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Fecha actual : |
27/11/2020 |
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Actualizado : |
27/11/2020 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Circulación / Nivel : |
Internacional - -- |
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Autor : |
CASTELLS, M.; CAFFARENA, D.; CASAUX, M.L.; SCHILD, C.; CASTELLS, F.; CASTELLS, D.; VICTORIA , M.; RIET-CORREA, F.; GIANNITTI, F.; PARREÑO, V.; COLINA, R. |
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Afiliación : |
MATÍAS CASTELLS BAUER, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay./Matías Castells Laboratorio de Virología Molecular, CENUR Litoral Norte, Centro Universitario de Salto, Universidad de la República, Rivera 1350, 50000 Salto, Uruguay.; RUBEN DARÍO CAFFARENA LEDESMA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay./Facultad de Veterinaria, Universidad de la República, Alberto Lasplaces 1620, Montevideo, Uruguay.; MARÍA LAURA CASAUX, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; CARLOS SCHILD, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; FELIPE CASTELLS, Felipe Castells Doctor en Veterinaria en ejercicio libre, asociado al Laboratorio de Virología Molecular, CENUR Litoral Norte, Centro Universitario de Salto, Universidad de la República, Uruguay.; DANIEL CASTELLS, Centro de Investigación y Experimentación Dr. Alejandro Gallinal, Secretariado Uruguayo de la Lana, Ruta 7 km 140, Cerro Colorado, Florida, Uruguay.; MATÍAS VICTORIA, Laboratorio de Virología Molecular, CENUR Litoral Norte, Centro Universitario de Salto, Universidad de la República, Rivera 1350, 50000 Salto, Uruguay.; FRANKLIN RIET-CORREA AMARAL, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; FEDERICO GIANNITTI, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; VIVIANA PARREÑO, Sección de Virus Gastroentéricos, Instituto de Virología, CICV y A, INTA Castelar, Buenos Aires, Argentina.; RODNEY COLINA, Laboratorio de Virología Molecular, CENUR Litoral Norte, Centro Universitario de Salto, Universidad de la República, Rivera 1350, 50000 Salto, Uruguay. |
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Título : |
Detection, risk factors and molecular diversity of norovirus GIII in cattle in Uruguay. |
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Fecha de publicación : |
2020 |
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Fuente / Imprenta : |
Infection, Genetics and Evolution, December 2020, Volume 86, Article number 104613. Doi: https://doi.org/10.1016/j.meegid.2020.104613 |
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DOI : |
10.1016/j.meegid.2020.104613 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received 1 August 2020 / Revised 27 October 2020 / Accepted 28 October 2020 / Available online 4 November 2020./ Corresponding authors at.: Laboratorio de Virología Molecular, CENUR Litoral Norte, Centro Universitario de Salto, Universidad de la República, Rivera, 1350,50000 Salto, Uruguay. |
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Contenido : |
Abstracts. Uruguay is a leading exporter of bovine meat and dairy products, and cattle production is one of the principal economic backbones in this country. A main clinical problem faced by livestock farmers is neonatal calf diarrhea (NCD); however, causes of NCD have not been extensively studied in Uruguay. Bovine norovirus (BoNoV) has been proposed as one of the possible etiologies of NCD as experimentally infected calves developed diarrhea and enteropathy, although limited information is available from field surveys. The aims of this study were to
determine the frequency of infection, to investigate possible risk factors, and to determine the molecular diversity of BoNoV in Uruguay. A total of 761 samples of feces or intestinal contents from dairy and beef calves were analyzed through RT-qPCR. The overall frequency of detection of BoNoV was 66.1% with higher frequency in dairy (70.5%) than beef (15.9%) calves (p < 0.01). BoNoV was detected similarly in diarrheic (78.8%) and non-diarrheic (76.2%) dairy calves (p = 0.50). Calves ?2 weeks of age (84%) were infected more often than older
(62.7%) calves (p < 0.01). Phylogenetic analysis confirmed the presence of GIII.1 and GIII.2 genotypes. In addition, we reported the circulation of recombinant strains and the detection of a strain with the recently described novel VP1 genotype. This study represents the first report describing the circulation, the associated risk factors, and the molecular diversity of BoNoV in Uruguay. |
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Palabras claves : |
BOVINE NOROVIRUS; CATTLE; DIARRHEA; GENOTYPES; PLATAFORMA DE SALUD ANIMAL. |
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Thesagro : |
GANADERIA; URUGUAY. |
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Asunto categoría : |
L73 Enfermedades de los animales |
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Marc : |
LEADER 02830naa a2200349 a 4500
001 1061525
005 2020-11-27
008 2020 bl uuuu u00u1 u #d
024 7 $a10.1016/j.meegid.2020.104613$2DOI
100 1 $aCASTELLS, M.
245 $aDetection, risk factors and molecular diversity of norovirus GIII in cattle in Uruguay.$h[electronic resource]
260 $c2020
500 $aArticle history: Received 1 August 2020 / Revised 27 October 2020 / Accepted 28 October 2020 / Available online 4 November 2020./ Corresponding authors at.: Laboratorio de Virología Molecular, CENUR Litoral Norte, Centro Universitario de Salto, Universidad de la República, Rivera, 1350,50000 Salto, Uruguay.
520 $aAbstracts. Uruguay is a leading exporter of bovine meat and dairy products, and cattle production is one of the principal economic backbones in this country. A main clinical problem faced by livestock farmers is neonatal calf diarrhea (NCD); however, causes of NCD have not been extensively studied in Uruguay. Bovine norovirus (BoNoV) has been proposed as one of the possible etiologies of NCD as experimentally infected calves developed diarrhea and enteropathy, although limited information is available from field surveys. The aims of this study were to determine the frequency of infection, to investigate possible risk factors, and to determine the molecular diversity of BoNoV in Uruguay. A total of 761 samples of feces or intestinal contents from dairy and beef calves were analyzed through RT-qPCR. The overall frequency of detection of BoNoV was 66.1% with higher frequency in dairy (70.5%) than beef (15.9%) calves (p < 0.01). BoNoV was detected similarly in diarrheic (78.8%) and non-diarrheic (76.2%) dairy calves (p = 0.50). Calves ?2 weeks of age (84%) were infected more often than older (62.7%) calves (p < 0.01). Phylogenetic analysis confirmed the presence of GIII.1 and GIII.2 genotypes. In addition, we reported the circulation of recombinant strains and the detection of a strain with the recently described novel VP1 genotype. This study represents the first report describing the circulation, the associated risk factors, and the molecular diversity of BoNoV in Uruguay.
650 $aGANADERIA
650 $aURUGUAY
653 $aBOVINE NOROVIRUS
653 $aCATTLE
653 $aDIARRHEA
653 $aGENOTYPES
653 $aPLATAFORMA DE SALUD ANIMAL
700 1 $aCAFFARENA, D.
700 1 $aCASAUX, M.L.
700 1 $aSCHILD, C.
700 1 $aCASTELLS, F.
700 1 $aCASTELLS, D.
700 1 $aVICTORIA , M.
700 1 $aRIET-CORREA, F.
700 1 $aGIANNITTI, F.
700 1 $aPARREÑO, V.
700 1 $aCOLINA, R.
773 $tInfection, Genetics and Evolution, December 2020, Volume 86, Article number 104613. Doi: https://doi.org/10.1016/j.meegid.2020.104613
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